TSS: Hg 243320.1: Difference between revisions
From referenceTSS
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|MTG8= | |MTG8= | ||
|ZMYND2= | |ZMYND2= | ||
|all_trans= | |all_trans=ENST00000342833.4:115 NM_199135:115 AY344642:115 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=115 | ||
|distance_to_tss= | |distance_to_tss=-322 | ||
|end=92062956 | |end=92062956 | ||
|end_of_center_position=68302752 | |end_of_center_position=68302752 | ||
|entrez_id=862 | |entrez_id=862 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
|gene_alias=AML1-MTG8 | |gene_alias=AML1-MTG8{{!}}AML1T1{{!}}CBFA2T1{{!}}CDR{{!}}ETO{{!}}MTG8{{!}}ZMYND2 | ||
|gene_description=RUNX1 | |gene_description=RUNX1 partner transcriptional co-repressor 1 | ||
|gene_id= | |gene_id=286380 | ||
|gene_name= | |gene_name=forkhead box D4 like 3 | ||
|gene_source=HGNC: | |gene_source=HGNC:18523 | ||
|gene_symbol= | |gene_symbol=FOXD4L3 | ||
|gene_synonyms= | |gene_synonyms=FOXD6 OTTHUMG00000019959 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC: | |hgnc_mgi_id=HGNC:18523 | ||
|nearest_ensembl=ENSG00000079102 | |nearest_ensembl=ENSG00000079102 | ||
|nearest_promoter_id=NM_004349 | |nearest_promoter_id=NM_004349 | ||
|nearest_refseq=NM_004349 | |nearest_refseq=NM_004349 | ||
|nearest_unigene=Hs.368431 | |nearest_unigene=Hs.368431 | ||
|num_trans= | |num_trans=3 | ||
|species=human | |species=human | ||
|start=92062955 | |start=92062955 | ||
|start_of_center_position=68302751 | |start_of_center_position=68302751 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENST00000342833.4 NM_199135 AY344642 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243320.1 | |tss_id=hg_243320.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=Q6VB84 | ||
}} | }} | ||
Revision as of 16:36, 17 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -322 |
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| Nearest PromoterID: | NM_004349 |
| Entrez ID: | 862 |
| Nearest Unigene: | Hs.368431 |
| Nearest Refseq: | NM_004349 |
| Nearest Ensembl: | ENSG00000079102 |
| Gene Name: | forkhead box D4 like 3 |
| Gene Alias: | AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 |
| Gene Description: | RUNX1 partner transcriptional co-repressor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.