TSS: Hg 100830.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=ENST00000662063.1:0 ENST00000453410.1:0 ENST00000652595.1:0 ENST00000526458.1:0 BC039385:0 ENST00000660402.1:1 ENST00000439418.1:-44 NR_038833:-44 ENST00000655860.1:-78 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
Line 9: | Line 9: | ||
|entrez_id=494558 | |entrez_id=494558 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=- | |gene_alias=C9orf135-AS1 | ||
|gene_description=C9orf135 | |gene_description=C9orf135 divergent transcript | ||
|gene_id=494558 | |gene_id=494558 | ||
|gene_name=C9orf135 | |gene_name=C9orf135 divergent transcript | ||
|gene_source=HGNC:48713 | |gene_source=HGNC:48713 | ||
|gene_symbol=C9orf135- | |gene_symbol=C9orf135-DT | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:48713 | |hgnc_mgi_id=HGNC:48713 | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000225626 | ||
|nearest_promoter_id=NR_038833 | |nearest_promoter_id=NR_038833 | ||
|nearest_refseq=NR_038833 | |nearest_refseq=NR_038833 | ||
|nearest_unigene=Hs.130722 | |nearest_unigene=Hs.130722 | ||
|num_trans= | |num_trans=9 | ||
|species=human | |species=human | ||
|start=69820660 | |start=69820660 | ||
|start_of_center_position=69820677 | |start_of_center_position=69820677 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000453410.1 | |transcript_name=ENST00000662063.1 ENST00000453410.1 ENST00000652595.1 ENST00000526458.1 BC039385 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100830.1 | |tss_id=hg_100830.1 |
Revision as of 15:29, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 61 |
---|---|
Nearest PromoterID: | NR_038833 |
Entrez ID: | 494558 |
Nearest Unigene: | Hs.130722 |
Nearest Refseq: | NR_038833 |
Nearest Ensembl: | ENSG00000225626 |
Gene Name: | C9orf135 divergent transcript |
Gene Alias: | C9orf135-AS1 |
Gene Description: | C9orf135 divergent transcript |
Gene Type: | ncRNA |
CpG%: | 0.055 |
GC%: | 0.577114 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.