TSS: Hg 143922.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000256379.9:0 ENST00000430055.6:0 ENST00000440435.2:0 ENST00000553611.5:0 ENST00000556044.5:0 ENST00000556495.5:0 ENST00000554870.5:0 ENST00000556...") |
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{{TSSDetail | {{TSSDetail | ||
|NY-REN-28= | |||
|all_trans=ENST00000256379.9:0 ENST00000430055.6:0 ENST00000440435.2:0 ENST00000553611.5:0 ENST00000556044.5:0 ENST00000556495.5:0 ENST00000554870.5:0 ENST00000556423.1:0 uc001xmf.5:0 uc010tth.4:0 uc010tti.4:0 uc059cwz.1:0 uc059cxa.1:0 uc059cxb.1:0 uc059cxc.1:0 uc059cxf.1:0 AK222587:0 AK300460:0 AK223346:0 AK290647:0 BC004106:0 AK304361:0 AF074723:0 U78082:0 AK300417:0 ENST00000554963.5:1 uc059cwx.1:1 KJ892891:5 ENST00000615788.4:-7 NM_001284211:-7 NM_005466:-7 NM_001284209:-7 NM_001284210:-7 uc032bfk.1:-7 BT006831:7 AB463868:7 CR541697:7 | |all_trans=ENST00000256379.9:0 ENST00000430055.6:0 ENST00000440435.2:0 ENST00000553611.5:0 ENST00000556044.5:0 ENST00000556495.5:0 ENST00000554870.5:0 ENST00000556423.1:0 uc001xmf.5:0 uc010tth.4:0 uc010tti.4:0 uc059cwz.1:0 uc059cxa.1:0 uc059cxb.1:0 uc059cxc.1:0 uc059cxf.1:0 AK222587:0 AK300460:0 AK223346:0 AK290647:0 BC004106:0 AK304361:0 AF074723:0 U78082:0 AK300417:0 ENST00000554963.5:1 uc059cwx.1:1 KJ892891:5 ENST00000615788.4:-7 NM_001284211:-7 NM_005466:-7 NM_001284209:-7 NM_001284210:-7 uc032bfk.1:-7 BT006831:7 AB463868:7 CR541697:7 | ||
|chr=chr14 | |chr=chr14 | ||
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|distance_to_tss=27 | |distance_to_tss=27 | ||
|end=70600683 | |end=70600683 | ||
|end_of_center_position=70600664 | |||
|entrez_id=10001 | |entrez_id=10001 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
|gene_alias=ARC33 | |gene_alias=ARC33 | ||
|gene_description=mediator complex subunit 6 | |gene_description=mediator complex subunit 6 | ||
|gene_id=10001 | |gene_id=10001 | ||
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|species=human | |species=human | ||
|start=70600643 | |start=70600643 | ||
|start_of_center_position=70600663 | |||
|strand=- | |strand=- | ||
|transcript_name=ENST00000256379.9 ENST00000430055.6 ENST00000440435.2 ENST00000553611.5 ENST00000556044.5 ENST00000556495.5 ENST00000554870.5 ENST00000556423.1 uc001xmf.5 uc010tth.4 uc010tti.4 uc059cwz.1 uc059cxa.1 uc059cxb.1 uc059cxc.1 uc059cxf.1 AK222587 AK300460 AK223346 AK290647 BC004106 AK304361 AF074723 U78082 AK300417 | |transcript_name=ENST00000256379.9 ENST00000430055.6 ENST00000440435.2 ENST00000553611.5 ENST00000556044.5 ENST00000556495.5 ENST00000554870.5 ENST00000556423.1 uc001xmf.5 uc010tth.4 uc010tti.4 uc059cwz.1 uc059cxa.1 uc059cxb.1 uc059cxc.1 uc059cxf.1 AK222587 AK300460 AK223346 AK290647 BC004106 AK304361 AF074723 U78082 AK300417 |
Revision as of 03:01, 14 May 2019
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 27 |
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Nearest PromoterID: | NM_001284211 |
Entrez ID: | 10001 |
Nearest Unigene: | Hs.497353 |
Nearest Refseq: | NM_005466 |
Nearest Ensembl: | ENSG00000133997 |
Gene Name: | mediator complex subunit 6 |
Gene Alias: | ARC33 |
Gene Description: | mediator complex subunit 6 |
Gene Type: | protein-coding |
CpG%: | 0.075 |
GC%: | 0.542289 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.