TSS: Hg 101288.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF331638:-334 MA567215:-334 LF331639:-421 MA567216:-421 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance= | |distance=-334 | ||
|distance_to_tss=-277 | |distance_to_tss=-277 | ||
|end=89310931 | |end=89310931 | ||
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|nearest_refseq=NM_001827 | |nearest_refseq=NM_001827 | ||
|nearest_unigene=Hs.83758 | |nearest_unigene=Hs.83758 | ||
|num_trans= | |num_trans=4 | ||
|species=human | |species=human | ||
|start=89310904 | |start=89310904 | ||
|start_of_center_position=89310917 | |start_of_center_position=89310917 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF331638 MA567215 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101288.1 | |tss_id=hg_101288.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} |
Latest revision as of 16:36, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -277 |
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Nearest PromoterID: | NM_001827 |
Entrez ID: | 1164 |
Nearest Unigene: | Hs.83758 |
Nearest Refseq: | NM_001827 |
Nearest Ensembl: | ENSG00000123975 |
Gene Name: | CKS2 |
Gene Alias: | CKSHS2 |
Gene Description: | CDC28 protein kinase regulatory subunit 2 |
Gene Type: | protein-coding |
CpG%: | 0.095 |
GC%: | 0.636816 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |