TSS: Hg 101401.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=NA | ||
|distance_to_tss=- | |distance_to_tss=-2265 | ||
|end=91952499 | |end=91952499 | ||
|end_of_center_position=91952494 | |end_of_center_position=91952494 | ||
|entrez_id=4920 | |entrez_id=4920 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
|gene_alias=BDB | |gene_alias=BDB{{!}}BDB1{{!}}NTRKR2 | ||
|gene_description=receptor tyrosine kinase like orphan receptor 2 | |gene_description=receptor tyrosine kinase like orphan receptor 2 | ||
|gene_name=ROR2 | |gene_name=ROR2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000169071 | |nearest_ensembl=ENSG00000169071 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_004560 | ||
|nearest_refseq=NM_004560 | |nearest_refseq=NM_004560 | ||
|nearest_unigene=Hs.98255 | |nearest_unigene=Hs.98255 | ||
| Line 23: | Line 23: | ||
|start_of_center_position=91952493 | |start_of_center_position=91952493 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-36(GGCTATAAAAGA,-,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:39, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -2265 |
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| Nearest PromoterID: | NM_004560 |
| Entrez ID: | 4920 |
| Nearest Unigene: | Hs.98255 |
| Nearest Refseq: | NM_004560 |
| Nearest Ensembl: | ENSG00000169071 |
| Gene Name: | ROR2 |
| Gene Alias: | BDB|BDB1|NTRKR2 |
| Gene Description: | receptor tyrosine kinase like orphan receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(GGCTATAAAAGA,-,0.00) |