TSS: Hg 101463.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|C9orf89= | |C9orf89= | ||
|all_trans=ENST00000428958. | |all_trans=ENST00000428958.2:-31 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=- | |distance=-31 | ||
|distance_to_tss=- | |distance_to_tss=-707 | ||
|end=93095515 | |end=93095515 | ||
|end_of_center_position=93095510 | |end_of_center_position=93095510 | ||
|entrez_id=84270 | |entrez_id=84270 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
|gene_alias=BinCARD | |gene_alias=BinCARD{{!}}C9orf89 | ||
|gene_description=caspase recruitment domain family member 19 | |gene_description=caspase recruitment domain family member 19 | ||
|gene_name=CARD19 | |gene_name=CARD19 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000165233 | |nearest_ensembl=ENSG00000165233 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_134467 | ||
|nearest_refseq=NM_032310 | |nearest_refseq=NM_032310 | ||
|nearest_unigene=Hs.434213 | |nearest_unigene=Hs.434213 | ||
|num_trans= | |num_trans=1 | ||
|species=human | |species=human | ||
|start=93095504 | |start=93095504 | ||
|start_of_center_position=93095509 | |start_of_center_position=93095509 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000428958. | |transcript_name=ENST00000428958.2 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101463.1 | |tss_id=hg_101463.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:40, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -707 |
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| Nearest PromoterID: | NR_134467 |
| Entrez ID: | 84270 |
| Nearest Unigene: | Hs.434213 |
| Nearest Refseq: | NM_032310 |
| Nearest Ensembl: | ENSG00000165233 |
| Gene Name: | CARD19 |
| Gene Alias: | BinCARD|C9orf89 |
| Gene Description: | caspase recruitment domain family member 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |