TSS: Mm 87304.1: Difference between revisions
From referenceTSS
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| Line 4: | Line 4: | ||
|Tlx= | |Tlx= | ||
|XTLL= | |XTLL= | ||
|all_trans=ENSMUST00000147899.1:11 ENSMUST00000105497.7:24 ENSMUST00000144806.7:27 | |all_trans=NR_169130:0 ENSMUST00000147899.1:11 ENSMUST00000105497.7:24 ENSMUST00000144806.7:27 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance= | |distance=0 | ||
|distance_to_tss=- | |distance_to_tss=-209 | ||
|end=42583811 | |end=42583811 | ||
|end_of_center_position=42583800 | |end_of_center_position=42583800 | ||
| Line 15: | Line 15: | ||
|frc= | |frc= | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
|gene_alias=Mtl1 | |gene_alias=Mtl1{{!}}Mtll{{!}}TLL{{!}}Tlx{{!}}XTLL{{!}}fierce{{!}}frc{{!}}tailless | ||
|gene_description= | |gene_description=nuclear receptor subfamily 2, group E, member 1 | ||
|gene_id= | |gene_id=102636808 | ||
|gene_name= | |gene_name=predicted gene, 38491 | ||
|gene_source=MGI: | |gene_source=MGI:5621376 | ||
|gene_symbol= | |gene_symbol=Gm38491 | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI: | |hgnc_mgi_id=MGI:5621376 | ||
|nearest_ensembl=ENSMUSG00000019803 | |nearest_ensembl=ENSMUSG00000019803 | ||
|nearest_promoter_id=NM_152229 | |nearest_promoter_id=NM_152229 | ||
|nearest_refseq=NM_152229 | |nearest_refseq=NM_152229 | ||
|nearest_unigene=Mm.287100 | |nearest_unigene=Mm.287100 | ||
|num_trans= | |num_trans=4 | ||
|species=mouse | |species=mouse | ||
|start=42583787 | |start=42583787 | ||
| Line 34: | Line 34: | ||
|strand=+ | |strand=+ | ||
|tailless= | |tailless= | ||
|transcript_name= | |transcript_name=NR_169130 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_87304.1 | |tss_id=mm_87304.1 | ||
Revision as of 23:16, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -209 |
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| Nearest PromoterID: | NM_152229 |
| Entrez ID: | 21907 |
| Nearest Unigene: | Mm.287100 |
| Nearest Refseq: | NM_152229 |
| Nearest Ensembl: | ENSMUSG00000019803 |
| Gene Name: | predicted gene, 38491 |
| Gene Alias: | Mtl1|Mtll|TLL|Tlx|XTLL|fierce|frc|tailless |
| Gene Description: | nuclear receptor subfamily 2, group E, member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.