TSS: Hg 144932.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|IFI53=
|IFP53=
|all_trans=M61715:12 ENST00000555410.5:48 uc059fdy.1:48 BC017489:-53 ENST00000556295.5:-54 uc059feo.1:-54 ENST00000557135.5:56 ENST00000556698.5:56 ENST00000554509.5:56 uc001yhg.3:56 uc059fdv.1:56 uc059fej.1:56 BC095453:56 ENST00000555813.5:59 uc059fem.1:59 ENST00000553808.5:-60 ENST00000557094.5:-60 uc059fdr.1:-60 uc059fee.1:-60 AK300255:-60 ENST00000554820.5:-62 ENST00000557347.5:-62 uc059feh.1:-62 uc059fei.1:-62 ENST00000557297.5:70 uc059fdp.1:70 X59892:83 ENST00000555464.1:-134 uc059fet.1:-134 NM_213646:-177 NM_004184:-177 ENST00000555031.5:-180 uc059fep.1:-180 ENST00000553395.5:-194 ENST00000553545.5:-194 uc059fdl.1:-194 uc059feg.1:-194 ENST00000344102.9:-195 uc001yhi.2:-195 ENST00000556338.5:-199 uc059fdu.1:-199 ENST00000392882.6:-231 uc001yhh.2:-231 ENST00000553934.1:-331 uc059fer.1:-331 ENST00000556695.5:454 uc059fen.1:454 ENST00000556660.5:461 uc059feb.1:461
|all_trans=M61715:12 ENST00000555410.5:48 uc059fdy.1:48 BC017489:-53 ENST00000556295.5:-54 uc059feo.1:-54 ENST00000557135.5:56 ENST00000556698.5:56 ENST00000554509.5:56 uc001yhg.3:56 uc059fdv.1:56 uc059fej.1:56 BC095453:56 ENST00000555813.5:59 uc059fem.1:59 ENST00000553808.5:-60 ENST00000557094.5:-60 uc059fdr.1:-60 uc059fee.1:-60 AK300255:-60 ENST00000554820.5:-62 ENST00000557347.5:-62 uc059feh.1:-62 uc059fei.1:-62 ENST00000557297.5:70 uc059fdp.1:70 X59892:83 ENST00000555464.1:-134 uc059fet.1:-134 NM_213646:-177 NM_004184:-177 ENST00000555031.5:-180 uc059fep.1:-180 ENST00000553395.5:-194 ENST00000553545.5:-194 uc059fdl.1:-194 uc059feg.1:-194 ENST00000344102.9:-195 uc001yhi.2:-195 ENST00000556338.5:-199 uc059fdu.1:-199 ENST00000392882.6:-231 uc001yhh.2:-231 ENST00000553934.1:-331 uc059fer.1:-331 ENST00000556695.5:454 uc059fen.1:454 ENST00000556660.5:461 uc059feb.1:461
|chr=chr14
|chr=chr14
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|distance_to_tss=182
|distance_to_tss=182
|end=100375413
|end=100375413
|end_of_center_position=100375408
|entrez_id=7453
|entrez_id=7453
|gc_percent=0.477612
|gc_percent=0.477612
|gene_alias=GAMMA-2|IFI53|IFP53
|gene_alias=GAMMA-2
|gene_description=tryptophanyl-tRNA synthetase
|gene_description=tryptophanyl-tRNA synthetase
|gene_id=7453
|gene_id=7453
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|species=human
|species=human
|start=100375402
|start=100375402
|start_of_center_position=100375407
|strand=-
|strand=-
|tata_box="28(GAGTATTAAAGA,-,0.00)"
|tata_box="28(GAGTATTAAAGA,-,0.00)"

Revision as of 05:48, 14 May 2019

Basic information about the TSS

TSS ID:hg_144932.1
Species:human
Chr:chr14
Start:100375402
End:100375413
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:M61715
Distance:12
GeneID:7453
HGNC/MGI_ID:HGNC:12729
UniProt_ID:
Gene_name:tryptophanyl-tRNA synthetase
Gene_symbol:WARS
Gene_synonyms:IFP53
Gene_source:HGNC:12729



TATA-Box annotation

Distance to TSS:182
Nearest PromoterID:NM_213646
Entrez ID:7453
Nearest Unigene:Hs.497599
Nearest Refseq:NM_004184
Nearest Ensembl:ENSG00000140105
Gene Name:tryptophanyl-tRNA synthetase
Gene Alias:GAMMA-2
Gene Description:tryptophanyl-tRNA synthetase
Gene Type:protein-coding
CpG%:0.01
GC%:0.477612
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"28(GAGTATTAAAGA,-,0.00)"



TSS expression

Expression data not found.

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