TSS: Hg 102172.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance= | |distance=NA | ||
|distance_to_tss=- | |distance_to_tss=-173 | ||
|end=114587609 | |end=114587609 | ||
|end_of_center_position=114587596 | |end_of_center_position=114587596 | ||
|entrez_id=9550 | |entrez_id=9550 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
|gene_alias=ATP6G | |gene_alias=ATP6G{{!}}ATP6G1{{!}}ATP6GL{{!}}ATP6J{{!}}Vma10 | ||
|gene_description=ATPase H+ transporting V1 subunit G1 | |gene_description=ATPase H+ transporting V1 subunit G1 | ||
|gene_name=ATP6V1G1 | |gene_name=ATP6V1G1 | ||
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|start_of_center_position=114587595 | |start_of_center_position=114587595 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=43(CTCTTTTAATGG,-,0.00),45(CTTTTAATGGCT,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 16:57, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -173 |
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| Nearest PromoterID: | NM_004888 |
| Entrez ID: | 9550 |
| Nearest Unigene: | Hs.388654 |
| Nearest Refseq: | NM_004888 |
| Nearest Ensembl: | ENSG00000136888 |
| Gene Name: | ATP6V1G1 |
| Gene Alias: | ATP6G|ATP6G1|ATP6GL|ATP6J|Vma10 |
| Gene Description: | ATPase H+ transporting V1 subunit G1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 43(CTCTTTTAATGG,-,0.00),45(CTTTTAATGGCT,+,0.00) |