TSS: Hg 102201.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-69226 | |distance_to_tss=-69226 | ||
|end=114999825 | |end=114999825 | ||
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|entrez_id=944 | |entrez_id=944 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=CD153 | |gene_alias=CD153{{!}}CD30L{{!}}CD30LG{{!}}TNLG3A | ||
|gene_description= | |gene_description=TNF superfamily member 8 | ||
|gene_name=TNFSF8 | |gene_name=TNFSF8 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
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|start_of_center_position=114999820 | |start_of_center_position=114999820 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=23(GCTTTAAAACAG,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:58, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -69226 |
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| Nearest PromoterID: | NM_001252290 |
| Entrez ID: | 944 |
| Nearest Unigene: | Hs.494901 |
| Nearest Refseq: | NM_001244 |
| Nearest Ensembl: | ENSG00000106952 |
| Gene Name: | TNFSF8 |
| Gene Alias: | CD153|CD30L|CD30LG|TNLG3A |
| Gene Description: | TNF superfamily member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 23(GCTTTAAAACAG,+,0.00) |