TSS: Hg 102333.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-2481 | |distance_to_tss=-2481 | ||
|end=120931671 | |end=120931671 | ||
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|entrez_id=7185 | |entrez_id=7185 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=EBI6 | |gene_alias=EBI6{{!}}MGC:10353 | ||
|gene_description=TNF receptor associated factor 1 | |gene_description=TNF receptor associated factor 1 | ||
|gene_name=TRAF1 | |gene_name=TRAF1 | ||
| Line 22: | Line 22: | ||
|start_of_center_position=120931653 | |start_of_center_position=120931653 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=59(GCTTTTATAGGC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:01, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -2481 |
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| Nearest PromoterID: | NM_001190945 |
| Entrez ID: | 7185 |
| Nearest Unigene: | Hs.531251 |
| Nearest Refseq: | NM_005658 |
| Nearest Ensembl: | ENSG00000056558 |
| Gene Name: | TRAF1 |
| Gene Alias: | EBI6|MGC:10353 |
| Gene Description: | TNF receptor associated factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 59(GCTTTTATAGGC,+,0.00) |