TSS: Hg 102526.1: Difference between revisions
From referenceTSS
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|ZNF-X= | |ZNF-X= | ||
|ZNF297B= | |ZNF297B= | ||
|all_trans=MP015421:113 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance= | |distance=113 | ||
|distance_to_tss=-82473 | |distance_to_tss=-82473 | ||
|end=126722536 | |end=126722536 | ||
| Line 10: | Line 11: | ||
|entrez_id=23099 | |entrez_id=23099 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=ZBTB22B | |gene_alias=ZBTB22B{{!}}ZNF-X{{!}}ZNF297B | ||
|gene_description=zinc finger and BTB domain containing 43 | |gene_description=zinc finger and BTB domain containing 43 | ||
|gene_name=ZBTB43 | |gene_name=ZBTB43 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000169155 | |nearest_ensembl=ENSG00000169155 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001135776 | ||
|nearest_refseq=NM_014007 | |nearest_refseq=NM_014007 | ||
|nearest_unigene=Hs.355581 | |nearest_unigene=Hs.355581 | ||
|num_trans= | |num_trans=1 | ||
|species=human | |species=human | ||
|start=126722529 | |start=126722529 | ||
|start_of_center_position=126722532 | |start_of_center_position=126722532 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-95(CCCTTTCTGGGC,+,0.00) | ||
|transcript_name= | |transcript_name=MP015421 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102526.1 | |tss_id=hg_102526.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:05, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -82473 |
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| Nearest PromoterID: | NM_001135776 |
| Entrez ID: | 23099 |
| Nearest Unigene: | Hs.355581 |
| Nearest Refseq: | NM_014007 |
| Nearest Ensembl: | ENSG00000169155 |
| Gene Name: | ZBTB43 |
| Gene Alias: | ZBTB22B|ZNF-X|ZNF297B |
| Gene Description: | zinc finger and BTB domain containing 43 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -95(CCCTTTCTGGGC,+,0.00) |