TSS: Hg 7356.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NM_001164246:461 NM_001164245 | |all_trans=LF205387:197 MA440964:197 NM_001164246:461 NM_001164245:461 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance= | |distance=197 | ||
|distance_to_tss= | |distance_to_tss=-41 | ||
|end=186375297 | |end=186375297 | ||
|end_of_center_position=186375294 | |end_of_center_position=186375294 | ||
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|gc_percent=0.597015 | |gc_percent=0.597015 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description= | |gene_description=translocated promoter region, nuclear basket protein | ||
|gene_id=54953 | |gene_id=54953 | ||
|gene_name= | |gene_name=TPR | ||
|gene_source=HGNC:24299 | |gene_source=HGNC:24299 | ||
|gene_symbol=C1orf27 | |gene_symbol=C1orf27 | ||
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|start_of_center_position=186375293 | |start_of_center_position=186375293 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=LF205387 MA440964 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_7356.1 | |tss_id=hg_7356.1 | ||
Latest revision as of 12:01, 18 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -41 |
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| Nearest PromoterID: | NM_003292 |
| Entrez ID: | 7175 |
| Nearest Unigene: | Hs.279640 |
| Nearest Refseq: | NM_003292 |
| Nearest Ensembl: | ENSG00000047410 |
| Gene Name: | TPR |
| Gene Alias: | - |
| Gene Description: | translocated promoter region, nuclear basket protein |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.