TSS: Hg 151310.1: Difference between revisions

Revision as of 13:58, 14 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000563790.5 ENST00000563404.1 uc059mqf.1 uc059mqi.1 AK001280 AF151900 AF110642 AB029156
Distance:	0
GeneID:	50810
HGNC/MGI_ID:
UniProt_ID:	H3BPQ6

Gene_name:	"hepatoma-derived growth factor, related protein 3"
Gene_symbol:	HDGFRP3
Gene_synonyms:	CGI-142 HDGF-2 HDGF2 HRP-3
Gene_source:	EntrezGene:50810

TATA-Box annotation

Distance to TSS:	466
Nearest PromoterID:	NM_016073
Entrez ID:	50810
Nearest Unigene:	Hs.513954
Nearest Refseq:	NM_016073
Nearest Ensembl:	ENSG00000166503
Gene Name:	"hepatoma-derived growth factor, related protein 3"
Gene Alias:	CGI-142
Gene Description:	"hepatoma-derived growth factor, related protein 3"
Gene Type:	protein-coding
CpG%:	0.16
GC%:	0.80597
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|HDGF-2=
+|HDGF2=
+|HRP-3=
 |all_trans=ENST00000563790.5:0 ENST00000563404.1:0 uc059mqf.1:0 uc059mqi.1:0 AK001280:0 AF151900:0 AF110642:0 AB029156:0 BC015483:5 ENST00000568129.1:67 uc059mqh.1:67 JF432598:97 AB529208:103 ENST00000299633.6:-431 NM_016073:-431 uc002bjs.3:-431 BC040554:-431
 |chr=chr15
@@ Line 6: / Line 9: @@
 |distance_to_tss=466
 |end=83207587
+|end_of_center_position=83207552
 |entrez_id=50810
 |gc_percent=0.80597
-|gene_alias=CGI-142|HDGF-2|HDGF2|HRP-3
+|gene_alias=CGI-142
 |gene_description="hepatoma-derived growth factor, related protein 3"
 |gene_id=50810
@@ Line 24: / Line 28: @@
 |species=human
 |start=83207516
+|start_of_center_position=83207551
 |strand=-
 |transcript_name=ENST00000563790.5 ENST00000563404.1 uc059mqf.1 uc059mqi.1 AK001280 AF151900 AF110642 AB029156