TSS: Hg 100541.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=35 |entrez_id=10850 |gc_percent=0.547264 |gene_alias=ALP|CTACK|CTAK|ESKINE|ILC|PESKY|SCYA27 |gene_description=C-C motif chemokine l...") |
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{{TSSDetail | {{TSSDetail | ||
|CTACK= | |||
|CTAK= | |||
|ESKINE= | |||
|ILC= | |||
|PESKY= | |||
|SCYA27= | |||
|all_trans=AJ243542:0 BC148263:21 BC166648:21 AF082393:22 ENST00000259631.4:-33 NM_006664:-33 uc003zvm.1:-33 AB010445:-33 | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=0 | |||
|distance_to_tss=35 | |distance_to_tss=35 | ||
|end=34662659 | |||
|entrez_id=10850 | |entrez_id=10850 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=ALP|CTACK|CTAK|ESKINE|ILC|PESKY|SCYA27 | |gene_alias=ALP|CTACK|CTAK|ESKINE|ILC|PESKY|SCYA27 | ||
|gene_description=C-C motif chemokine ligand 27 | |gene_description=C-C motif chemokine ligand 27 | ||
|gene_name=CCL27 | |gene_id=10850 | ||
|gene_name=C-C motif chemokine ligand 27 | |||
|gene_source=HGNC:10626 | |||
|gene_symbol=CCL27 | |||
|gene_synonyms=ALP CTACK CTAK ESkine ILC PESKY skinkine | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:10626 | |||
|nearest_ensembl=ENSG00000213927 | |nearest_ensembl=ENSG00000213927 | ||
|nearest_promoter_id=NM_006664 | |nearest_promoter_id=NM_006664 | ||
|nearest_refseq=NM_006664 | |nearest_refseq=NM_006664 | ||
|nearest_unigene=Hs.648124 | |nearest_unigene=Hs.648124 | ||
|num_trans=8 | |||
|species=human | |||
|start=34662654 | |||
|strand=- | |||
|transcript_name=AJ243542 | |||
|tss_classification=no | |||
|tss_id=hg_100541.1 | |tss_id=hg_100541.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_006664 |
| Entrez ID: | 10850 |
| Nearest Unigene: | Hs.648124 |
| Nearest Refseq: | NM_006664 |
| Nearest Ensembl: | ENSG00000213927 |
| Gene Name: | C-C motif chemokine ligand 27 |
| Gene Alias: | ALP |
| Gene Description: | C-C motif chemokine ligand 27 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.