TSS: Mm 109442.1: Difference between revisions
From referenceTSS
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|Rage= | |Rage= | ||
|Stk30= | |Stk30= | ||
|all_trans=ENSMUST00000181348.1:0 | |all_trans=ENSMUST00000181348.1:0 NR_152102:0 AK014831:0 AK015341:26 | ||
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=0 | ||
|end=110841037 | |end=110841037 | ||
|end_of_center_position=110841030 | |end_of_center_position=110841030 | ||
|entrez_id= | |entrez_id=66709 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias= | |gene_alias=- | ||
|gene_description= | |gene_description=RIKEN cDNA 4921507G05 gene | ||
|gene_id=66709 | |gene_id=66709 | ||
|gene_name=RIKEN cDNA 4921507G05 gene | |gene_name=RIKEN cDNA 4921507G05 gene | ||
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|gene_symbol=4921507G05Rik | |gene_symbol=4921507G05Rik | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type= | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:1913959 | |hgnc_mgi_id=MGI:1913959 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_152102 | ||
|nearest_refseq= | |nearest_refseq=NR_152102 | ||
|nearest_unigene=Mm. | |nearest_unigene=Mm.390504 | ||
|num_trans=4 | |num_trans=4 | ||
|species=mouse | |species=mouse | ||
| Line 29: | Line 29: | ||
|start_of_center_position=110841029 | |start_of_center_position=110841029 | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box=-33(GGGTTTAAAAAC,-,0.00) | ||
|transcript_name=ENSMUST00000181348.1 | |transcript_name=ENSMUST00000181348.1 NR_152102 AK014831 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_109442.1 | |tss_id=mm_109442.1 | ||
Revision as of 19:48, 19 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 0 |
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| Nearest PromoterID: | NR_152102 |
| Entrez ID: | 66709 |
| Nearest Unigene: | Mm.390504 |
| Nearest Refseq: | NR_152102 |
| Nearest Ensembl: | |
| Gene Name: | RIKEN cDNA 4921507G05 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 4921507G05 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.095 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GGGTTTAAAAAC,-,0.00) |
TSS expression
Expression data not found.