TSS: Hg 100554.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000626300.1:-23 NR_109756:-23 uc033cpp.2:-23 | |||
|chr=chr9 | |||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=-23 | |||
|distance_to_tss=29 | |distance_to_tss=29 | ||
|end=34989356 | |||
|entrez_id=101926900 | |entrez_id=101926900 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=DNAJB5 antisense RNA 1 (head to head) | |gene_description=DNAJB5 antisense RNA 1 (head to head) | ||
|gene_name=DNAJB5-AS1 | |gene_id=101926900 | ||
|gene_name=DNAJB5 antisense RNA 1 (head to head) | |||
|gene_source=HGNC:49846 | |||
|gene_symbol=DNAJB5-AS1 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:49846 | |||
|nearest_ensembl=ENSG00000281491 | |nearest_ensembl=ENSG00000281491 | ||
|nearest_promoter_id=NR_109756 | |nearest_promoter_id=NR_109756 | ||
|nearest_refseq=NR_109756 | |nearest_refseq=NR_109756 | ||
|nearest_unigene=Hs.545814 | |nearest_unigene=Hs.545814 | ||
|num_trans=3 | |||
|species=human | |||
|start=34989344 | |||
|strand=- | |||
|tata_box="63(CAGCCTTAAAGG,-,0.00)" | |tata_box="63(CAGCCTTAAAGG,-,0.00)" | ||
|transcript_name=ENST00000626300.1 NR_109756 uc033cpp.2 | |||
|tss_classification=yes | |||
|tss_id=hg_100554.1 | |tss_id=hg_100554.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 29 |
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| Nearest PromoterID: | NR_109756 |
| Entrez ID: | 101926900 |
| Nearest Unigene: | Hs.545814 |
| Nearest Refseq: | NR_109756 |
| Nearest Ensembl: | ENSG00000281491 |
| Gene Name: | DNAJB5 antisense RNA 1 (head to head) |
| Gene Alias: | - |
| Gene Description: | DNAJB5 antisense RNA 1 (head to head) |
| Gene Type: | ncRNA |
| CpG%: | 0.055 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "63(CAGCCTTAAAGG,-,0.00)" |
TSS expression
Expression data not found.