TSS: Mm 60273.1: Difference between revisions
From referenceTSS
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|PSTS= | |PSTS= | ||
|Prss17= | |Prss17= | ||
|all_trans=ENSMUST00000007161.7:1 | |all_trans=ENSMUST00000007161.7:1 NM_019928:1 AK087426:1 AF019979:13 BC100716:41 BC100717:41 BC100718:41 BC100719:41 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=1 | |distance=1 | ||
|distance_to_tss=- | |distance_to_tss=-3 | ||
|end=43881159 | |end=43881159 | ||
|end_of_center_position=43881157 | |end_of_center_position=43881157 | ||
|entrez_id=56640 | |entrez_id=56640 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
|gene_alias=ESMP1 | |gene_alias=ESMP1{{!}}KLK-L1{{!}}PSTS{{!}}Prss17 | ||
|gene_description= | |gene_description=kallikrein related-peptidase 4 (prostase, enamel matrix, prostate) | ||
|gene_id=56640 | |gene_id=56640 | ||
|gene_name= | |gene_name=kallikrein related-peptidase 4 (prostase, enamel matrix, prostate) | ||
|gene_source=MGI:1861379 | |gene_source=MGI:1861379 | ||
|gene_symbol=Klk4 | |gene_symbol=Klk4 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_019928 | |nearest_refseq=NM_019928 | ||
|nearest_unigene=Mm.42080 | |nearest_unigene=Mm.42080 | ||
|num_trans= | |num_trans=8 | ||
|species=mouse | |species=mouse | ||
|start=43881154 | |start=43881154 | ||
|start_of_center_position=43881156 | |start_of_center_position=43881156 | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box=-32(GCTTATAAGCCC,+,0.00) | ||
|transcript_name=ENSMUST00000007161.7 AK087426 | |transcript_name=ENSMUST00000007161.7 NM_019928 AK087426 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_60273.1 | |tss_id=mm_60273.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9Z0M1 | |uniprot_id=A0A1R3UDT0 Q9Z0M1 | ||
}} | }} | ||
Revision as of 13:04, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -3 |
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| Nearest PromoterID: | NM_019928 |
| Entrez ID: | 56640 |
| Nearest Unigene: | Mm.42080 |
| Nearest Refseq: | NM_019928 |
| Nearest Ensembl: | ENSMUSG00000006948 |
| Gene Name: | kallikrein related-peptidase 4 (prostase, enamel matrix, prostate) |
| Gene Alias: | ESMP1|KLK-L1|PSTS|Prss17 |
| Gene Description: | kallikrein related-peptidase 4 (prostase, enamel matrix, prostate) |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GCTTATAAGCCC,+,0.00) |
TSS expression
Expression data not found.