TSS: Hg 129858.1: Difference between revisions

From referenceTSS
Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{TSSDetail
{{TSSDetail
|all_trans=ENST00000316048.2:0 NM_001013698:0 uc001rck.1:0 AK092637:0 BC132752:4 BC132754:4
|all_trans=ENST00000316048.2:0 NM_001013698:0 AK092637:0 BC132752:4 BC132754:4
|chr=chr12
|chr=chr12
|cpg_percent=0.01
|cpg_percent=0.01
Line 22: Line 22:
|nearest_refseq=NM_001013698
|nearest_refseq=NM_001013698
|nearest_unigene=Hs.220931
|nearest_unigene=Hs.220931
|num_trans=6
|num_trans=5
|species=human
|species=human
|start=14814161
|start=14814161
|start_of_center_position=14814175
|start_of_center_position=14814175
|strand=-
|strand=-
|transcript_name=ENST00000316048.2 NM_001013698 uc001rck.1 AK092637
|transcript_name=ENST00000316048.2 NM_001013698 AK092637
|tss_classification=no
|tss_classification=no
|tss_id=hg_129858.1
|tss_id=hg_129858.1

Revision as of 03:41, 16 June 2021

Basic information about the TSS


TSS ID:hg_129858.1
Species:human
Chr:chr12
Start:14814161
End:14814189
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:ENST00000316048.2 NM_001013698 AK092637
Distance:0
GeneID:440087
HGNC/MGI_ID:HGNC:34401
UniProt_ID:A2RU48
Gene_name:single-pass membrane protein with coiled-coil domains 3
Gene_symbol:SMCO3
Gene_synonyms:LOC440087
Gene_source:HGNC:34401



TATA-Box annotation


Distance to TSS:7
Nearest PromoterID:NM_001013698
Entrez ID:440087
Nearest Unigene:Hs.220931
Nearest Refseq:NM_001013698
Nearest Ensembl:ENSG00000179256
Gene Name:single-pass membrane protein with coiled-coil domains 3
Gene Alias:C12orf69
Gene Description:single-pass membrane protein with coiled-coil domains 3
Gene Type:protein-coding
CpG%:0.01
GC%:0.402985
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.