TSS: Hg 130335.1: Difference between revisions
From referenceTSS
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|KRG2= | |KRG2= | ||
|WABS= | |WABS= | ||
|all_trans=ENST00000500527.1:-44 NR_038927 | |all_trans=ENST00000669174.1:0 ENST00000500527.1:-44 NR_038927:-44 AK096360:-44 ENST00000618041.1:266 | ||
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance= | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=59 | ||
|end=31073803 | |end=31073803 | ||
|end_of_center_position=31073788 | |end_of_center_position=31073788 | ||
|entrez_id= | |entrez_id=100506660 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias= | |gene_alias=CONCR{{!}}SCAT4 | ||
|gene_description= | |gene_description=DDX11 antisense RNA 1 | ||
|gene_id=100506660 | |gene_id=100506660 | ||
|gene_name=DDX11 antisense RNA 1 | |gene_name=DDX11 antisense RNA 1 | ||
|gene_source=HGNC:44176 | |gene_source=HGNC:44176 | ||
|gene_symbol=DDX11-AS1 | |gene_symbol=DDX11-AS1 | ||
|gene_synonyms= | |gene_synonyms=CONCR SCAT4 | ||
|gene_type= | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:44176 | |hgnc_mgi_id=HGNC:44176 | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000245614 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_038927 | ||
|nearest_refseq= | |nearest_refseq=NR_038927 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.586774 | ||
|num_trans= | |num_trans=5 | ||
|species=human | |species=human | ||
|start=31073772 | |start=31073772 | ||
|start_of_center_position=31073787 | |start_of_center_position=31073787 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENST00000669174.1 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_130335.1 | |tss_id=hg_130335.1 | ||
Revision as of 03:52, 16 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 59 |
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| Nearest PromoterID: | NR_038927 |
| Entrez ID: | 100506660 |
| Nearest Unigene: | Hs.586774 |
| Nearest Refseq: | NR_038927 |
| Nearest Ensembl: | ENSG00000245614 |
| Gene Name: | DDX11 antisense RNA 1 |
| Gene Alias: | CONCR|SCAT4 |
| Gene Description: | DDX11 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.11 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.