TSS: Hg 100595.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=1128 |entrez_id=27240 |gc_percent=0.666667 |gene_alias=SIT|SIT-R |gene_description=signaling threshold regulating transmembrane...") |
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{{TSSDetail | {{TSSDetail | ||
|SIT-R= | |||
|chr=chr9 | |||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance= | |||
|distance_to_tss=1128 | |distance_to_tss=1128 | ||
|end=35649826 | |||
|entrez_id=27240 | |entrez_id=27240 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_014450 | |nearest_refseq=NM_014450 | ||
|nearest_unigene=Hs.88012 | |nearest_unigene=Hs.88012 | ||
|num_trans=0 | |||
|species=human | |||
|start=35649817 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100595.1 | |tss_id=hg_100595.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:12, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1128 |
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| Nearest PromoterID: | NM_014450 |
| Entrez ID: | 27240 |
| Nearest Unigene: | Hs.88012 |
| Nearest Refseq: | NM_014450 |
| Nearest Ensembl: | ENSG00000137078 |
| Gene Name: | SIT1 |
| Gene Alias: | SIT |
| Gene Description: | signaling threshold regulating transmembrane adaptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |