TSS: Mm 79456.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-87800 | |distance_to_tss=-87800 | ||
|end=56248873 | |end=56248873 | ||
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|entrez_id=56434 | |entrez_id=56434 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
|gene_alias=1700055K04Rik | |gene_alias=1700055K04Rik{{!}}TM4-A{{!}}Tm4sf8 | ||
|gene_description=tetraspanin 3 | |gene_description=tetraspanin 3 | ||
|gene_name=Tspan3 | |gene_name=Tspan3 | ||
| Line 23: | Line 23: | ||
|start_of_center_position=56248870 | |start_of_center_position=56248870 | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box=-32(CTTTATATAAAC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 20:21, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -87800 |
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| Nearest PromoterID: | NM_019793 |
| Entrez ID: | 56434 |
| Nearest Unigene: | Mm.28484 |
| Nearest Refseq: | NM_019793 |
| Nearest Ensembl: | ENSMUSG00000032324 |
| Gene Name: | Tspan3 |
| Gene Alias: | 1700055K04Rik|TM4-A|Tm4sf8 |
| Gene Description: | tetraspanin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(CTTTATATAAAC,+,0.00) |