TSS: Mm 84375.1: Difference between revisions
From referenceTSS
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|Hspc121= | |Hspc121= | ||
|Ptplad1= | |Ptplad1= | ||
|all_trans=ENSMUST00000036615. | |all_trans=ENSMUST00000036615.6:0 NM_021345:0 BC057023:0 BC031755:0 AK051735:0 AK159494:0 AK050556:0 AK052865:0 LF197663:-6 MA433240:-6 Z97207:103 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 14: | Line 14: | ||
|entrez_id=57874 | |entrez_id=57874 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=4930523M17Rik | |gene_alias=4930523M17Rik{{!}}AW742319{{!}}B-ind1{{!}}Hcad3{{!}}Hspc121{{!}}Ptplad1 | ||
|gene_description=3-hydroxyacyl-CoA dehydratase 3 | |gene_description=3-hydroxyacyl-CoA dehydratase 3 | ||
|gene_id=57874 | |gene_id=57874 | ||
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|nearest_refseq=NM_021345 | |nearest_refseq=NM_021345 | ||
|nearest_unigene=Mm.308180 | |nearest_unigene=Mm.308180 | ||
|num_trans= | |num_trans=11 | ||
|species=mouse | |species=mouse | ||
|start=65021645 | |start=65021645 | ||
|start_of_center_position=65021681 | |start_of_center_position=65021681 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000036615. | |transcript_name=ENSMUST00000036615.6 NM_021345 BC057023 BC031755 AK051735 AK159494 AK050556 AK052865 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_84375.1 | |tss_id=mm_84375.1 | ||
Revision as of 22:11, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 36 |
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| Nearest PromoterID: | NM_021345 |
| Entrez ID: | 57874 |
| Nearest Unigene: | Mm.308180 |
| Nearest Refseq: | NM_021345 |
| Nearest Ensembl: | ENSMUSG00000033629 |
| Gene Name: | 3-hydroxyacyl-CoA dehydratase 3 |
| Gene Alias: | 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 |
| Gene Description: | 3-hydroxyacyl-CoA dehydratase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.