TSS: Hg 10064.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=-316 |entrez_id=148479 |gc_percent=0.781095 |gene_alias=PHF5|SPOC1 |gene_description=PHD finger protein 13 |gene_name=PHF13 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
|SPOC1= | |||
|chr=chr1 | |||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance= | |||
|distance_to_tss=-316 | |distance_to_tss=-316 | ||
|end=6613393 | |||
|entrez_id=148479 | |entrez_id=148479 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
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|nearest_refseq=NM_153812 | |nearest_refseq=NM_153812 | ||
|nearest_unigene=Hs.516079 | |nearest_unigene=Hs.516079 | ||
|num_trans=0 | |||
|species=human | |||
|start=6613366 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_10064.1 | |tss_id=hg_10064.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 17:13, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -316 |
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Nearest PromoterID: | NM_153812 |
Entrez ID: | 148479 |
Nearest Unigene: | Hs.516079 |
Nearest Refseq: | NM_153812 |
Nearest Ensembl: | ENSG00000116273 |
Gene Name: | PHF13 |
Gene Alias: | PHF5 |
Gene Description: | PHD finger protein 13 |
Gene Type: | protein-coding |
CpG%: | 0.13 |
GC%: | 0.781095 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |