TSS: Hg 100641.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-4343 |entrez_id=10488 |gc_percent=0.502488 |gene_alias=LUMAN|LZIP|sLZIP |gene_description=cAMP responsive element binding prot...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|LZIP= | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |||
|distance_to_tss=-4343 | |distance_to_tss=-4343 | ||
|end=35727984 | |||
|entrez_id=10488 | |entrez_id=10488 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_006368 | |nearest_refseq=NM_006368 | ||
|nearest_unigene=Hs.522110 | |nearest_unigene=Hs.522110 | ||
|num_trans=0 | |||
|sLZIP= | |||
|species=human | |||
|start=35727970 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100641.1 | |tss_id=hg_100641.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:13, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -4343 |
|---|---|
| Nearest PromoterID: | NM_006368 |
| Entrez ID: | 10488 |
| Nearest Unigene: | Hs.522110 |
| Nearest Refseq: | NM_006368 |
| Nearest Ensembl: | ENSG00000107175 |
| Gene Name: | CREB3 |
| Gene Alias: | LUMAN |
| Gene Description: | cAMP responsive element binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |