TSS: Mm 80493.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|5730419A02Rik= | |5730419A02Rik= | ||
|all_trans=ENSMUST00000034896.12:0 ENSMUST00000148238.1:0 ENSMUST00000150850.1:0 NM_026658 | |all_trans=ENSMUST00000034896.12:0 ENSMUST00000148238.1:0 ENSMUST00000150850.1:0 NM_026658:0 AK019088:0 AK017573:0 AF369902:0 BC063256:0 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
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|entrez_id=68291 | |entrez_id=68291 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=2310039H01Rik | |gene_alias=2310039H01Rik{{!}}5730419A02Rik | ||
|gene_description=mitochondrial tRNA translation optimization 1 | |gene_description=mitochondrial tRNA translation optimization 1 | ||
|gene_id=68291 | |gene_id=68291 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_026658 | |nearest_refseq=NM_026658 | ||
|nearest_unigene=Mm.291779 | |nearest_unigene=Mm.291779 | ||
|num_trans= | |num_trans=8 | ||
|species=mouse | |species=mouse | ||
|start=78448192 | |start=78448192 | ||
|start_of_center_position=78448210 | |start_of_center_position=78448210 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000034896.12 ENSMUST00000148238.1 ENSMUST00000150850.1 NM_026658 | |transcript_name=ENSMUST00000034896.12 ENSMUST00000148238.1 ENSMUST00000150850.1 NM_026658 AK019088 AK017573 AF369902 BC063256 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_80493.1 | |tss_id=mm_80493.1 | ||
Revision as of 20:44, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 0 |
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| Nearest PromoterID: | NM_026658 |
| Entrez ID: | 68291 |
| Nearest Unigene: | Mm.291779 |
| Nearest Refseq: | NM_026658 |
| Nearest Ensembl: | ENSMUSG00000032342 |
| Gene Name: | mitochondrial tRNA translation optimization 1 |
| Gene Alias: | 2310039H01Rik|5730419A02Rik |
| Gene Description: | mitochondrial tRNA translation optimization 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.