TSS: Hg 154252.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|MT-IB= | |||
|MT1= | |||
|MT1Q= | |||
|MTP= | |||
|all_trans=ENST00000334346.2:10 NM_005947:10 uc002ejs.3:10 AY168638:10 AF349000:11 BC069421:15 ENST00000562399.1:37 uc059umj.1:37 BC137478:43 BC137479:43 KJ891645:65 EU832249:66 EU832155:66 | |all_trans=ENST00000334346.2:10 NM_005947:10 uc002ejs.3:10 AY168638:10 AF349000:11 BC069421:15 ENST00000562399.1:37 uc059umj.1:37 BC137478:43 BC137479:43 KJ891645:65 EU832249:66 EU832155:66 | ||
|chr=chr16 | |chr=chr16 | ||
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|distance_to_tss=-12 | |distance_to_tss=-12 | ||
|end=56651889 | |end=56651889 | ||
|end_of_center_position=56651887 | |||
|entrez_id=4490 | |entrez_id=4490 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
|gene_alias=MT-1B | |gene_alias=MT-1B | ||
|gene_description=metallothionein 1B | |gene_description=metallothionein 1B | ||
|gene_id=4490 | |gene_id=4490 | ||
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|species=human | |species=human | ||
|start=56651884 | |start=56651884 | ||
|start_of_center_position=56651886 | |||
|strand=+ | |strand=+ | ||
|tata_box="-34(GACTATAAAGGG,-,0.00)" | |tata_box="-34(GACTATAAAGGG,-,0.00)" | ||
Revision as of 19:38, 14 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -12 |
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| Nearest PromoterID: | NM_005947 |
| Entrez ID: | 4490 |
| Nearest Unigene: | Hs.656629 |
| Nearest Refseq: | NM_005947 |
| Nearest Ensembl: | ENSG00000169688 |
| Gene Name: | metallothionein 1B |
| Gene Alias: | MT-1B |
| Gene Description: | metallothionein 1B |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(GACTATAAAGGG,-,0.00)" |
TSS expression
Expression data not found.