TSS: Hg 158180.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr16 |cpg_percent=0.02 |distance= |distance_to_tss=-925 |end=75536117 |entrez_id=23563 |gc_percent=0.587065 |gene_alias=I-GlcNAc-6-ST|I-GlcNAc6ST|glcNAc6ST-3...") |
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{{TSSDetail | {{TSSDetail | ||
|I-GlcNAc6ST= | |||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 5: | Line 6: | ||
|distance_to_tss=-925 | |distance_to_tss=-925 | ||
|end=75536117 | |end=75536117 | ||
|end_of_center_position=75536095 | |||
|entrez_id=23563 | |entrez_id=23563 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
|gene_alias=I-GlcNAc-6-ST | |gene_alias=I-GlcNAc-6-ST | ||
|gene_description=carbohydrate sulfotransferase 5 | |gene_description=carbohydrate sulfotransferase 5 | ||
|gene_name=CHST5 | |gene_name=CHST5 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|glcNAc6ST-3= | |||
|gn6st-3= | |||
|hIGn6ST= | |||
|nearest_ensembl=ENSG00000135702 | |nearest_ensembl=ENSG00000135702 | ||
|nearest_promoter_id=NM_024533 | |nearest_promoter_id=NM_024533 | ||
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|species=human | |species=human | ||
|start=75536072 | |start=75536072 | ||
|start_of_center_position=75536094 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Revision as of 21:11, 14 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -925 |
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| Nearest PromoterID: | NM_024533 |
| Entrez ID: | 23563 |
| Nearest Unigene: | Hs.745424 |
| Nearest Refseq: | NM_012126 |
| Nearest Ensembl: | ENSG00000135702 |
| Gene Name: | CHST5 |
| Gene Alias: | I-GlcNAc-6-ST |
| Gene Description: | carbohydrate sulfotransferase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |