TSS: Hg 163870.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|P2X5=
|P2X5R=
|all_trans=ENST00000552276.5:7 ENST00000547178.5:7 uc059zqq.1:7 uc002fwk.4:7 BC028084:18 BC039015:-18 BC006220:37 ENST00000551178.5:70 uc002fwj.4:70 AF016709:70 U49395:70 U49396:70 AF070573:71 ENST00000550383.1:-78 uc059zqp.1:-78 AB209623:-78 AB528606:94 HQ448518:97 KJ891740:97 CU691640:97 BC016917:-98 DQ234349:98 ENST00000345901.7:-100 uc002fwl.4:-100 AK307959:-119 ENST00000547933.1:-124 uc059zqv.1:-124 BC008319:-124 ENST00000225328.9:-288 NR_037928:-288 NM_001204520:-288 NM_001204519:-288 NM_175080:-288 NM_002561:-288 uc002fwi.4:-288 AK290889:-288
|all_trans=ENST00000552276.5:7 ENST00000547178.5:7 uc059zqq.1:7 uc002fwk.4:7 BC028084:18 BC039015:-18 BC006220:37 ENST00000551178.5:70 uc002fwj.4:70 AF016709:70 U49395:70 U49396:70 AF070573:71 ENST00000550383.1:-78 uc059zqp.1:-78 AB209623:-78 AB528606:94 HQ448518:97 KJ891740:97 CU691640:97 BC016917:-98 DQ234349:98 ENST00000345901.7:-100 uc002fwl.4:-100 AK307959:-119 ENST00000547933.1:-124 uc059zqv.1:-124 BC008319:-124 ENST00000225328.9:-288 NR_037928:-288 NM_001204520:-288 NM_001204519:-288 NM_175080:-288 NM_002561:-288 uc002fwi.4:-288 AK290889:-288
|chr=chr17
|chr=chr17
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|distance_to_tss=295
|distance_to_tss=295
|end=3696116
|end=3696116
|end_of_center_position=3696110
|entrez_id=5026
|entrez_id=5026
|gc_percent=0.771144
|gc_percent=0.771144
|gene_alias=LRH-1|P2X5|P2X5R
|gene_alias=LRH-1
|gene_description=purinergic receptor P2X 5
|gene_description=purinergic receptor P2X 5
|gene_id=100533970 5026
|gene_id=100533970 5026
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|species=human
|species=human
|start=3696102
|start=3696102
|start_of_center_position=3696109
|strand=-
|strand=-
|transcript_name=ENST00000552276.5 ENST00000547178.5 uc059zqq.1 uc002fwk.4
|transcript_name=ENST00000552276.5 ENST00000547178.5 uc059zqq.1 uc002fwk.4

Revision as of 22:47, 14 May 2019

Basic information about the TSS

TSS ID:hg_163870.1
Species:human
Chr:chr17
Start:3696102
End:3696116
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:ENST00000552276.5 ENST00000547178.5 uc059zqq.1 uc002fwk.4
Distance:7
GeneID:100533970 5026
HGNC/MGI_ID:HGNC:49191 HGNC:8536
UniProt_ID:K7EQ78 Q93086
Gene_name:P2RX5-TAX1BP3 readthrough (NMD candidate); purinergic receptor P2X 5
Gene_symbol:P2RX5 P2RX5-TAX1BP3
Gene_synonyms:LRH-1 P2X5
Gene_source:HGNC:49191 HGNC:8536



TATA-Box annotation

Distance to TSS:295
Nearest PromoterID:NM_001204520
Entrez ID:5026
Nearest Unigene:Hs.731607
Nearest Refseq:NM_002561
Nearest Ensembl:ENSG00000083454
Gene Name:P2RX5-TAX1BP3 readthrough (NMD candidate); purinergic receptor P2X 5
Gene Alias:LRH-1
Gene Description:purinergic receptor P2X 5
Gene Type:protein-coding
CpG%:0.145
GC%:0.771144
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.

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