TSS: Mm 150825.1: Difference between revisions

Revision as of 23:15, 14 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

Gene and protein annotation

Transcript_name:	ENSMUST00000131032.1 ENSMUST00000040455.4 NM_176958 uc008hpx.1 uc008hpy.1 BC130013 AK154774 AK084960 AK043636 AK141867
Distance:	0
GeneID:	319594
HGNC/MGI_ID:	MGI:2442345
UniProt_ID:	Q8BLR9 Q8BLR9-2

Gene_name:	"hypoxia-inducible factor 1, alpha subunit inhibitor"
Gene_symbol:	Hif1an
Gene_synonyms:	2310046M24Rik A830014H24Rik FIH
Gene_source:	MGI:2442345

TATA-Box annotation

Distance to TSS:	6
Nearest PromoterID:	NM_176958
Entrez ID:	319594
Nearest Unigene:	Mm.145278
Nearest Refseq:	NM_176958
Nearest Ensembl:	ENSMUSG00000036450
Gene Name:	"hypoxia-inducible factor 1, alpha subunit inhibitor"
Gene Alias:	2310046M24Rik
Gene Description:	"hypoxia-inducible factor 1, alpha subunit inhibitor"
Gene Type:	protein-coding
CpG%:	0.085
GC%:	0.61194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):	"-97(CTACTTAAAAGG,-,0.00)"

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|A830014H24Rik=
+|FIH=
+|FIH1=
 |all_trans=ENSMUST00000131032.1:0 ENSMUST00000040455.4:0 NM_176958:0 uc008hpx.1:0 uc008hpy.1:0 BC130013:0 AK154774:0 AK084960:0 AK043636:0 AK141867:0
 |chr=chr19
@@ Line 6: / Line 9: @@
 |distance_to_tss=6
 |end=44562879
+|end_of_center_position=44562861
 |entrez_id=319594
 |gc_percent=0.61194
-|gene_alias=2310046M24Rik|A830014H24Rik|FIH|FIH1
+|gene_alias=2310046M24Rik
 |gene_description="hypoxia-inducible factor 1, alpha subunit inhibitor"
 |gene_id=319594
@@ Line 24: / Line 28: @@
 |species=mouse
 |start=44562841
+|start_of_center_position=44562860
 |strand=+
 |tata_box="-97(CTACTTAAAAGG,-,0.00)"