TSS: Hg 168750.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|ACTG= | |||
|BRWS2= | |||
|DFNA20= | |||
|DFNA26= | |||
|HEL-176= | |||
|all_trans=BC021033:0 BC023606:0 BC017450:-10 BC004223:-36 DQ589977:-37 BC063495:-50 BT019856:-59 DQ891374:-59 KJ896370:-59 KR711165:-59 KR711166:-59 KR711167:-59 KR711168:-59 KJ905681:-59 EU176631:-59 EU832621:-59 EU832693:-59 KJ904414:-59 CU676328:-59 CU680176:-59 ENST00000576209.5:110 uc060ljr.1:110 BC039144:285 BC023548:329 ENST00000574671.5:412 uc060ljq.1:412 ENST00000576214.2:-453 uc060ljw.1:-453 ENST00000615544.4:-460 uc021ufb.2:-460 BC001920:-460 BC015779:-467 ENST00000571691.5:-468 uc060ljx.1:-468 ENST00000571721.5:-483 uc060lka.1:-483 BC053572:-484 ENST00000573283.5:-485 ENST00000576917.5:-485 uc002kak.3:-485 uc060ljp.1:-485 BC021036:-485 ENST00000575842.5:-486 ENST00000572105.6:-486 uc060ljo.1:-486 uc060lju.1:-486 BC015005:-486 BC009848:-488 BC019044:-489 BC010999:-490 BC007442:-491 BC012050:-491 BC018774:-491 BC015695:-493 ENST00000575087.5:-495 uc060ljs.1:-495 ENST00000576544.5:-496 uc060ljt.1:-496 BC000292:-497 | |all_trans=BC021033:0 BC023606:0 BC017450:-10 BC004223:-36 DQ589977:-37 BC063495:-50 BT019856:-59 DQ891374:-59 KJ896370:-59 KR711165:-59 KR711166:-59 KR711167:-59 KR711168:-59 KJ905681:-59 EU176631:-59 EU832621:-59 EU832693:-59 KJ904414:-59 CU676328:-59 CU680176:-59 ENST00000576209.5:110 uc060ljr.1:110 BC039144:285 BC023548:329 ENST00000574671.5:412 uc060ljq.1:412 ENST00000576214.2:-453 uc060ljw.1:-453 ENST00000615544.4:-460 uc021ufb.2:-460 BC001920:-460 BC015779:-467 ENST00000571691.5:-468 uc060ljx.1:-468 ENST00000571721.5:-483 uc060lka.1:-483 BC053572:-484 ENST00000573283.5:-485 ENST00000576917.5:-485 uc002kak.3:-485 uc060ljp.1:-485 BC021036:-485 ENST00000575842.5:-486 ENST00000572105.6:-486 uc060ljo.1:-486 uc060lju.1:-486 BC015005:-486 BC009848:-488 BC019044:-489 BC010999:-490 BC007442:-491 BC012050:-491 BC018774:-491 BC015695:-493 ENST00000575087.5:-495 uc060ljs.1:-495 ENST00000576544.5:-496 uc060ljt.1:-496 BC000292:-497 | ||
|chr=chr17 | |chr=chr17 | ||
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|distance_to_tss=589 | |distance_to_tss=589 | ||
|end=81512295 | |end=81512295 | ||
|end_of_center_position=81512278 | |||
|entrez_id=71 | |entrez_id=71 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=ACT | |gene_alias=ACT | ||
|gene_description=actin gamma 1 | |gene_description=actin gamma 1 | ||
|gene_name=ACTG1 | |gene_name=ACTG1 | ||
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|species=human | |species=human | ||
|start=81512259 | |start=81512259 | ||
|start_of_center_position=81512277 | |||
|strand=- | |strand=- | ||
|transcript_name=BC021033 BC023606 | |transcript_name=BC021033 BC023606 | ||
Revision as of 08:13, 15 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 589 |
|---|---|
| Nearest PromoterID: | NR_037688 |
| Entrez ID: | 71 |
| Nearest Unigene: | Hs.514581 |
| Nearest Refseq: | NM_001614 |
| Nearest Ensembl: | ENSG00000184009 |
| Gene Name: | ACTG1 |
| Gene Alias: | ACT |
| Gene Description: | actin gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |