TSS: Hg 86327.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr7 |cpg_percent=0.02 |distance= |distance_to_tss=41906 |end=134933372 |entrez_id=800 |gc_percent=0.452736 |gene_alias=CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
|H-CAD= | |||
|HCAD= | |||
|L-CAD= | |||
|LCAD= | |||
|NAG22= | |||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 5: | Line 10: | ||
|distance_to_tss=41906 | |distance_to_tss=41906 | ||
|end=134933372 | |end=134933372 | ||
|end_of_center_position=134933306 | |||
|entrez_id=800 | |entrez_id=800 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
|gene_alias=CDM | |gene_alias=CDM | ||
|gene_description=caldesmon 1 | |gene_description=caldesmon 1 | ||
|gene_name=CALD1 | |gene_name=CALD1 | ||
| Line 18: | Line 24: | ||
|species=human | |species=human | ||
|start=134933239 | |start=134933239 | ||
|start_of_center_position=134933305 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Revision as of 10:31, 15 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 41906 |
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| Nearest PromoterID: | NM_033140 |
| Entrez ID: | 800 |
| Nearest Unigene: | Hs.490203 |
| Nearest Refseq: | NM_004342 |
| Nearest Ensembl: | ENSG00000122786 |
| Gene Name: | CALD1 |
| Gene Alias: | CDM |
| Gene Description: | caldesmon 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |