TSS: Hg 170401.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr18 |cpg_percent=0.055 |distance= |distance_to_tss=34178 |end=58255703 |entrez_id=23327 |gc_percent=0.616915 |gene_alias=NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NEDD4.2= | |||
|PVNH7= | |||
|RSP5= | |||
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 5: | Line 8: | ||
|distance_to_tss=34178 | |distance_to_tss=34178 | ||
|end=58255703 | |end=58255703 | ||
|end_of_center_position=58255700 | |||
|entrez_id=23327 | |entrez_id=23327 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=NEDD4 | |gene_alias=NEDD4-2 | ||
|gene_description="neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase" | |gene_description="neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase" | ||
|gene_name=NEDD4L | |gene_name=NEDD4L | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hNEDD4-2= | |||
|nearest_ensembl=ENSG00000049759 | |nearest_ensembl=ENSG00000049759 | ||
|nearest_promoter_id=NM_001144966 | |nearest_promoter_id=NM_001144966 | ||
| Line 18: | Line 23: | ||
|species=human | |species=human | ||
|start=58255696 | |start=58255696 | ||
|start_of_center_position=58255699 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Revision as of 11:17, 15 May 2019
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 34178 |
|---|---|
| Nearest PromoterID: | NM_001144966 |
| Entrez ID: | 23327 |
| Nearest Unigene: | Hs.185677 |
| Nearest Refseq: | NM_015277 |
| Nearest Ensembl: | ENSG00000049759 |
| Gene Name: | NEDD4L |
| Gene Alias: | NEDD4-2 |
| Gene Description: | "neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase" |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |