TSS: Hg 170406.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr18 |cpg_percent=0.015 |distance= |distance_to_tss=-88594 |end=58362493 |entrez_id=406906 |gc_percent=0.447761 |gene_alias=MIR122A|MIRN122|MIRN122A|hsa-mir-...") |
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{{TSSDetail | {{TSSDetail | ||
|MIRN122= | |||
|MIRN122A= | |||
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 5: | Line 7: | ||
|distance_to_tss=-88594 | |distance_to_tss=-88594 | ||
|end=58362493 | |end=58362493 | ||
|end_of_center_position=58362481 | |||
|entrez_id=406906 | |entrez_id=406906 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=MIR122A | |gene_alias=MIR122A | ||
|gene_description=microRNA 122 | |gene_description=microRNA 122 | ||
|gene_name=MIR122 | |gene_name=MIR122 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hsa-mir-122= | |||
|miRNA122= | |||
|miRNA122A= | |||
|mir-122= | |||
|nearest_ensembl=ENSG00000267391 | |nearest_ensembl=ENSG00000267391 | ||
|nearest_promoter_id=NR_029667 | |nearest_promoter_id=NR_029667 | ||
| Line 18: | Line 25: | ||
|species=human | |species=human | ||
|start=58362467 | |start=58362467 | ||
|start_of_center_position=58362480 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Revision as of 11:17, 15 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -88594 |
|---|---|
| Nearest PromoterID: | NR_029667 |
| Entrez ID: | 406906 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_029667 |
| Nearest Ensembl: | ENSG00000267391 |
| Gene Name: | MIR122 |
| Gene Alias: | MIR122A |
| Gene Description: | microRNA 122 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |