TSS: Mm 16427.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NR_045331:0 uc008oja.1:0 AK140896:0 |chr=chr2 |cpg_percent=0.055 |distance=0 |distance_to_tss=4 |end=180385617 |entrez_id=622283 |gc_percent=0.646766 |g...") |
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{{TSSDetail | {{TSSDetail | ||
|Gm6307= | |||
|all_trans=NR_045331:0 uc008oja.1:0 AK140896:0 | |all_trans=NR_045331:0 uc008oja.1:0 AK140896:0 | ||
|chr=chr2 | |chr=chr2 | ||
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|distance_to_tss=4 | |distance_to_tss=4 | ||
|end=180385617 | |end=180385617 | ||
|end_of_center_position=180385609 | |||
|entrez_id=622283 | |entrez_id=622283 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias=EG622283 | |gene_alias=EG622283 | ||
|gene_description=Mir1a-1 and Mir133a-2 host gene | |gene_description=Mir1a-1 and Mir133a-2 host gene | ||
|gene_id=622283 | |gene_id=622283 | ||
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|species=mouse | |species=mouse | ||
|start=180385599 | |start=180385599 | ||
|start_of_center_position=180385608 | |||
|strand=+ | |strand=+ | ||
|tata_box="-36(GGGTATATAAGA,-,0.00)" | |tata_box="-36(GGGTATATAAGA,-,0.00)" | ||
Revision as of 12:18, 15 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 4 |
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| Nearest PromoterID: | NR_045331 |
| Entrez ID: | 622283 |
| Nearest Unigene: | Mm.447602 |
| Nearest Refseq: | NR_045331 |
| Nearest Ensembl: | |
| Gene Name: | predicted gene 6307 |
| Gene Alias: | EG622283 |
| Gene Description: | Mir1a-1 and Mir133a-2 host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.055 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-36(GGGTATATAAGA,-,0.00)" |
TSS expression
Expression data not found.