TSS: Mm 26735.1: Difference between revisions

Revision as of 12:37, 15 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

Gene and protein annotation

Gene_name:	peroxisomal biogenesis factor 2; peroxisomal biogenesis factor 5-like
Gene_symbol:	Pex2 Pex5l
Gene_synonyms:	1700016J08Rik D3Ertd138e PMP35 PXR2 Pex2 Pxmp3 TRIP8b Zellweger_syndrome_homolog
Gene_source:	MGI:107486 MGI:1916672

TATA-Box annotation

Distance to TSS:	23
Nearest PromoterID:	NM_001163301
Entrez ID:	19302
Nearest Unigene:	Mm.132336
Nearest Refseq:	NM_008994
Nearest Ensembl:	ENSMUSG00000040374
Gene Name:	peroxisomal biogenesis factor 2; peroxisomal biogenesis factor 5-like
Gene Alias:	D3Ertd138e
Gene Description:	peroxisomal biogenesis factor 2
Gene Type:	protein-coding
CpG%:	0.09
GC%:	0.61194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|PAF-1=
+|PMP35=
+|Pxmp3=
 |all_trans=ENSMUST00000059021.9:-8 AF031128:-8 NM_001163306:-17 NM_001163305:-17 NM_001163302:-17 NM_001163301:-17 NM_008994:-17 NM_001267715:-17 NM_001267714:-17 uc008ooc.3:-17 uc012cmz.2:-17 uc008ood.3:-17 uc012cnb.2:-17 uc012cna.2:-17 uc033hsb.1:-17 uc008oob.3:-17 AK146530:69 ENSMUST00000165309.7:70 ENSMUST00000164828.7:70 ENSMUST00000195855.5:75 AK151121:75 AK152331:75 ENSMUST00000071280.7:92 BC012404:92 AK053821:121
 |chr=chr3
@@ Line 6: / Line 9: @@
 |distance_to_tss=23
 |end=5576231
+|end_of_center_position=5576226
 |entrez_id=19302
 |gc_percent=0.61194
-|gene_alias=D3Ertd138e|PAF-1|PMP35|Pxmp3
+|gene_alias=D3Ertd138e
 |gene_description=peroxisomal biogenesis factor 2
 |gene_id=19302
@@ Line 24: / Line 28: @@
 |species=mouse
 |start=5576219
+|start_of_center_position=5576225
 |strand=-
 |transcript_name=ENSMUST00000059021.9 AF031128