TSS: Mm 22907.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_008857:0 uc008ovs.1:0 AK144979:0 AK147710:0 AK167411:0 ENSMUST00000108249.8:-8 AK220517:-8 BC021630:43 D28577:108 |chr=chr3 |cpg_percent=0.15 |distan...") |
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{{TSSDetail | {{TSSDetail | ||
|AI427505= | |||
|PKClambda= | |||
|Pkci= | |||
|Pkcl= | |||
|Prkcl= | |||
|aPKClambda= | |||
|all_trans=NM_008857:0 uc008ovs.1:0 AK144979:0 AK147710:0 AK167411:0 ENSMUST00000108249.8:-8 AK220517:-8 BC021630:43 D28577:108 | |all_trans=NM_008857:0 uc008ovs.1:0 AK144979:0 AK147710:0 AK167411:0 ENSMUST00000108249.8:-8 AK220517:-8 BC021630:43 D28577:108 | ||
|chr=chr3 | |chr=chr3 | ||
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|distance_to_tss=40 | |distance_to_tss=40 | ||
|end=30995868 | |end=30995868 | ||
|end_of_center_position=30995812 | |||
|entrez_id=18759 | |entrez_id=18759 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
|gene_alias=2310021H13Rik | |gene_alias=2310021H13Rik | ||
|gene_description="protein kinase C, iota" | |gene_description="protein kinase C, iota" | ||
|gene_id=18759 | |gene_id=18759 | ||
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|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:99260 | |hgnc_mgi_id=MGI:99260 | ||
|mKIAA4165= | |||
|nearest_ensembl=ENSMUSG00000037643 | |nearest_ensembl=ENSMUSG00000037643 | ||
|nearest_promoter_id=NM_008857 | |nearest_promoter_id=NM_008857 | ||
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|species=mouse | |species=mouse | ||
|start=30995754 | |start=30995754 | ||
|start_of_center_position=30995811 | |||
|strand=+ | |strand=+ | ||
|transcript_name=NM_008857 uc008ovs.1 AK144979 AK147710 AK167411 | |transcript_name=NM_008857 uc008ovs.1 AK144979 AK147710 AK167411 | ||
Revision as of 13:24, 15 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_008857 |
| Entrez ID: | 18759 |
| Nearest Unigene: | Mm.291554 |
| Nearest Refseq: | NM_008857 |
| Nearest Ensembl: | ENSMUSG00000037643 |
| Gene Name: | "protein kinase C, iota" |
| Gene Alias: | 2310021H13Rik |
| Gene Description: | "protein kinase C, iota" |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.