TSS: Hg 100093.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF355472:-378 MA591049:-378 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=-378 | ||
|distance_to_tss=-148037 | |distance_to_tss=-148037 | ||
|end=16424372 | |end=16424372 | ||
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|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000205549 | |nearest_ensembl=ENSG00000205549 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001364979 | ||
|nearest_refseq=NM_001271829 | |nearest_refseq=NM_001271829 | ||
|nearest_unigene=Hs.586441 | |nearest_unigene=Hs.586441 | ||
|num_trans= | |num_trans=2 | ||
|species=human | |species=human | ||
|start=16424327 | |start=16424327 | ||
|start_of_center_position=16424349 | |start_of_center_position=16424349 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF355472 MA591049 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100093.1 | |tss_id=hg_100093.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:29, 11 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -148037 |
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| Nearest PromoterID: | NM_001364979 |
| Entrez ID: | 100129385 |
| Nearest Unigene: | Hs.586441 |
| Nearest Refseq: | NM_001271829 |
| Nearest Ensembl: | ENSG00000205549 |
| Gene Name: | C9orf92 |
| Gene Alias: | Em:AL513424.1 |
| Gene Description: | chromosome 9 open reading frame 92 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |