TSS: Hg 100249.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
Line 17: | Line 17: | ||
|P19ARF= | |P19ARF= | ||
|TP16= | |TP16= | ||
|all_trans=KJ901333:-177 ENST00000578845.2:-301 ENST00000380150.2 | |all_trans=KJ901333:-177 ENST00000578845.2:-301 ENST00000380150.2:-301 ENST00000479692.2:-315 ENST00000497750.1:-369 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
Line 26: | Line 26: | ||
|entrez_id=1029 | |entrez_id=1029 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
|gene_alias=ARF | |gene_alias=ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16 | ||
|gene_description=cyclin dependent kinase inhibitor 2A | |gene_description=cyclin dependent kinase inhibitor 2A | ||
|gene_name=CDKN2A | |gene_name=CDKN2A | ||
Line 34: | Line 34: | ||
|nearest_refseq=NM_000077 | |nearest_refseq=NM_000077 | ||
|nearest_unigene=Hs.512599 | |nearest_unigene=Hs.512599 | ||
|num_trans= | |num_trans=5 | ||
|species=human | |species=human | ||
|start=21971017 | |start=21971017 |
Revision as of 14:20, 14 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 3803 |
---|---|
Nearest PromoterID: | NM_058197 |
Entrez ID: | 1029 |
Nearest Unigene: | Hs.512599 |
Nearest Refseq: | NM_000077 |
Nearest Ensembl: | ENSG00000147889 |
Gene Name: | CDKN2A |
Gene Alias: | ARF |
Gene Description: | cyclin dependent kinase inhibitor 2A |
Gene Type: | protein-coding |
CpG%: | 0.12 |
GC%: | 0.731343 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |