TSS: Hg 100341.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|INFE1= | |INFE1= | ||
|all_trans=ENST00000657557.1:-242 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=-242 | ||
|distance_to_tss=-26313 | |distance_to_tss=-26313 | ||
|end=27498009 | |end=27498009 | ||
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|entrez_id=56832 | |entrez_id=56832 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
|gene_alias=IFNT1 | |gene_alias=IFNT1|INFE1 | ||
|gene_description=interferon kappa | |gene_description=interferon kappa | ||
|gene_name=IFNK | |gene_name=IFNK | ||
| Line 17: | Line 18: | ||
|nearest_refseq=NM_020124 | |nearest_refseq=NM_020124 | ||
|nearest_unigene=Hs.591083 | |nearest_unigene=Hs.591083 | ||
|num_trans= | |num_trans=1 | ||
|species=human | |species=human | ||
|start=27497993 | |start=27497993 | ||
|start_of_center_position=27498001 | |start_of_center_position=27498001 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENST00000657557.1 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100341.1 | |tss_id=hg_100341.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Revision as of 14:23, 14 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -26313 |
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| Nearest PromoterID: | NM_020124 |
| Entrez ID: | 56832 |
| Nearest Unigene: | Hs.591083 |
| Nearest Refseq: | NM_020124 |
| Nearest Ensembl: | ENSG00000147896 |
| Gene Name: | IFNK |
| Gene Alias: | IFNT1 |
| Gene Description: | interferon kappa |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |