TSS: Hg 100541.1: Difference between revisions
From referenceTSS
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| Line 6: | Line 6: | ||
|PESKY= | |PESKY= | ||
|SCYA27= | |SCYA27= | ||
|all_trans=AJ243542:0 | |all_trans=ENST00000259631.5:0 NM_006664:0 AJ243542:0 BC166648:21 AF082393:22 BC148263:25 AB010445:-33 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=0 | ||
|end=34662659 | |end=34662659 | ||
|end_of_center_position=34662657 | |end_of_center_position=34662657 | ||
|entrez_id=10850 | |entrez_id=10850 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=ALP | |gene_alias=ALP|CTACK|CTAK|ESKINE|ILC|PESKY|SCYA27 | ||
|gene_description=C-C motif chemokine ligand 27 | |gene_description=C-C motif chemokine ligand 27 | ||
|gene_id=10850 | |gene_id=10850 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_006664 | |nearest_refseq=NM_006664 | ||
|nearest_unigene=Hs.648124 | |nearest_unigene=Hs.648124 | ||
|num_trans= | |num_trans=7 | ||
|species=human | |species=human | ||
|start=34662654 | |start=34662654 | ||
|start_of_center_position=34662656 | |start_of_center_position=34662656 | ||
|strand=- | |strand=- | ||
|transcript_name=AJ243542 | |transcript_name=ENST00000259631.5 NM_006664 AJ243542 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100541.1 | |tss_id=hg_100541.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=Q5VZ77 Q9Y4X3 | ||
}} | }} | ||
Revision as of 15:22, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 0 |
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| Nearest PromoterID: | NM_006664 |
| Entrez ID: | 10850 |
| Nearest Unigene: | Hs.648124 |
| Nearest Refseq: | NM_006664 |
| Nearest Ensembl: | ENSG00000213927 |
| Gene Name: | C-C motif chemokine ligand 27 |
| Gene Alias: | ALP |
| Gene Description: | C-C motif chemokine ligand 27 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.