TSS: Hg 100567.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|all_trans=ENST00000361778.6:0 ENST00000465745.6:0 ENST00000492770.1:0 NM_152850:0 uc003zwf.4:0 uc064swb.1:0 uc064swe.1:0 AK074064:0 ENST00000474436.1:8 uc003zwc.2:8 AK090433:8 NM_032634:9 NM_001201484:9 ENST00000378617.3:10 uc003zwd.4:10 AL833956:10 ENST00000472208.1:304 uc064swd.1:304 ENST00000298004.9:338 uc003zwe.4:338 BC065282:338
|all_trans=ENST00000378617.4:0 ENST00000361778.6:0 ENST00000465745.6:0 ENST00000492770.1:0 NM_152850:0 NM_032634:0 AK074064:0 ENST00000474436.1:8 AK090433:8 NM_001201484:9 AL833956:10 LF206427:-111 MA442004:-111 ENST00000472208.1:304 ENST00000298004.9:338 BC065282:338
|chr=chr9
|chr=chr9
|cpg_percent=0.085
|cpg_percent=0.085
Line 22: Line 22:
|nearest_refseq=NM_032634
|nearest_refseq=NM_032634
|nearest_unigene=Hs.522099
|nearest_unigene=Hs.522099
|num_trans=21
|num_trans=16
|species=human
|species=human
|start=35096557
|start=35096557
|start_of_center_position=35096598
|start_of_center_position=35096598
|strand=-
|strand=-
|transcript_name=ENST00000361778.6 ENST00000465745.6 ENST00000492770.1 NM_152850 uc003zwf.4 uc064swb.1 uc064swe.1 AK074064
|transcript_name=ENST00000378617.4 ENST00000361778.6 ENST00000465745.6 ENST00000492770.1 NM_152850 NM_032634 AK074064
|tss_classification=yes
|tss_classification=yes
|tss_id=hg_100567.1
|tss_id=hg_100567.1

Revision as of 15:22, 15 June 2021

Basic information about the TSS

TSS ID:hg_100567.1
Species:human
Chr:chr9
Start:35096557
End:35096640
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:ENST00000378617.4 ENST00000361778.6 ENST00000465745.6 ENST00000492770.1 NM_152850 NM_032634 AK074064
Distance:0
GeneID:84720
HGNC/MGI_ID:HGNC:23215
UniProt_ID:Q8TEQ8
Gene_name:phosphatidylinositol glycan anchor biosynthesis class O
Gene_symbol:PIGO
Gene_synonyms:DKFZp434M222 FLJ00135
Gene_source:HGNC:23215



TATA-Box annotation

Distance to TSS:2
Nearest PromoterID:NM_152850
Entrez ID:84720
Nearest Unigene:Hs.522099
Nearest Refseq:NM_032634
Nearest Ensembl:ENSG00000165282
Gene Name:phosphatidylinositol glycan anchor biosynthesis class O
Gene Alias:HPMRS2
Gene Description:phosphatidylinositol glycan anchor biosynthesis class O
Gene Type:protein-coding
CpG%:0.085
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.

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