TSS: Hg 100638.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|LZIP= | |LZIP= | ||
|all_trans=LF354351:57 MA589928:57 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=57 | ||
|distance_to_tss= | |distance_to_tss=4488 | ||
|end=35727708 | |end=35727708 | ||
|end_of_center_position=35727707 | |end_of_center_position=35727707 | ||
|entrez_id= | |entrez_id=7094 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
|gene_alias= | |gene_alias=ILWEQ|TLN|talin-1 | ||
|gene_description= | |gene_description=talin 1 | ||
|gene_name= | |gene_name=TLN1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000137076 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_006289 | ||
|nearest_refseq= | |nearest_refseq=NM_006289 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.471014 | ||
|num_trans= | |num_trans=2 | ||
|sLZIP= | |sLZIP= | ||
|species=human | |species=human | ||
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|start_of_center_position=35727706 | |start_of_center_position=35727706 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF354351 MA589928 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100638.1 | |tss_id=hg_100638.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Revision as of 15:24, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 4488 |
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| Nearest PromoterID: | NM_006289 |
| Entrez ID: | 7094 |
| Nearest Unigene: | Hs.471014 |
| Nearest Refseq: | NM_006289 |
| Nearest Ensembl: | ENSG00000137076 |
| Gene Name: | TLN1 |
| Gene Alias: | ILWEQ |
| Gene Description: | talin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |