TSS: Hg 10072.1: Difference between revisions

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|chr=chr1
|chr=chr1
|cpg_percent=0.005
|cpg_percent=0.005
|distance=
|distance=NA
|distance_to_tss=-470286
|distance_to_tss=88771
|end=7300992
|end=7300992
|end_of_center_position=7300983
|end_of_center_position=7300983
|entrez_id=9341
|entrez_id=102725193
|gc_percent=0.353234
|gc_percent=0.353234
|gene_alias=CEB
|gene_alias=-
|gene_description=vesicle associated membrane protein 3
|gene_description=uncharacterized LOC102725193
|gene_name=VAMP3
|gene_name=LOC102725193
|gene_type=protein-coding
|gene_type=ncRNA
|nearest_ensembl=ENSG00000049245
|nearest_ensembl=ENSG00000237728
|nearest_promoter_id=NM_004781
|nearest_promoter_id=NR_146200
|nearest_refseq=NM_004781
|nearest_refseq=NR_146199
|nearest_unigene=Hs.66708
|nearest_unigene=Hs.666120
|num_trans=0
|num_trans=0
|species=human
|species=human

Latest revision as of 15:26, 15 June 2021

Basic information about the TSS


TSS ID:hg_10072.1
Species:human
Chr:chr1
Start:7300973
End:7300992
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:
Distance:NA
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:LOC102725193
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:88771
Nearest PromoterID:NR_146200
Entrez ID:102725193
Nearest Unigene:Hs.666120
Nearest Refseq:NR_146199
Nearest Ensembl:ENSG00000237728
Gene Name:LOC102725193
Gene Alias:-
Gene Description:uncharacterized LOC102725193
Gene Type:ncRNA
CpG%:0.005
GC%:0.353234
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):