TSS: Hg 10073.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000618051.1:134 | |all_trans=ENST00000618051.1:134 NR_146199:134 NR_146201:134 NR_146200:134 AK128074:360 ENST00000411708.1:469 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=134 | |distance=134 | ||
|distance_to_tss=- | |distance_to_tss=-154 | ||
|end=7389928 | |end=7389928 | ||
|end_of_center_position=7389908 | |end_of_center_position=7389908 | ||
|entrez_id= | |entrez_id=102725193 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias= | |gene_alias=- | ||
|gene_description= | |gene_description=uncharacterized LOC102725193 | ||
|gene_name= | |gene_id=102725193 | ||
|gene_type= | |gene_name=CAMTA1 antisense RNA 2 | ||
|nearest_ensembl= | |gene_source=HGNC:40855 | ||
|nearest_promoter_id= | |gene_symbol=CAMTA1-AS2 | ||
|nearest_refseq= | |gene_synonyms= | ||
|nearest_unigene=Hs. | |gene_type=ncRNA | ||
|num_trans= | |hgnc_mgi_id=HGNC:40855 | ||
|nearest_ensembl=ENSG00000237728 | |||
|nearest_promoter_id=NR_146201 | |||
|nearest_refseq=NR_146199 | |||
|nearest_unigene=Hs.666120 | |||
|num_trans=6 | |||
|species=human | |species=human | ||
|start=7389887 | |start=7389887 | ||
|start_of_center_position=7389907 | |start_of_center_position=7389907 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000618051.1 | |transcript_name=ENST00000618051.1 NR_146199 NR_146201 NR_146200 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_10073.1 | |tss_id=hg_10073.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} | ||
Revision as of 15:26, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -154 |
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| Nearest PromoterID: | NR_146201 |
| Entrez ID: | 102725193 |
| Nearest Unigene: | Hs.666120 |
| Nearest Refseq: | NR_146199 |
| Nearest Ensembl: | ENSG00000237728 |
| Gene Name: | CAMTA1 antisense RNA 2 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC102725193 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.