TSS: Hg 100792.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=BC065527:0 BC011779:-36 | |all_trans=BC065527:0 ENST00000665642.1:-21 BC011779:-36 ENST00000365604.1:201 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 1410 | |gene_description=long intergenic non-protein coding RNA 1410 | ||
|gene_name= | |gene_id=107987020 | ||
|gene_name=uncharacterized LOC107987020 | |||
|gene_source=EntrezGene:107987020 | |||
|gene_symbol=LOC107987020 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |||
|nearest_ensembl=ENSG00000238113 | |nearest_ensembl=ENSG00000238113 | ||
|nearest_promoter_id=NR_121647 | |nearest_promoter_id=NR_121647 | ||
|nearest_refseq=NR_121647 | |nearest_refseq=NR_121647 | ||
|nearest_unigene=Hs.351215 | |nearest_unigene=Hs.351215 | ||
|num_trans= | |num_trans=4 | ||
|species=human | |species=human | ||
|start=62802638 | |start=62802638 | ||
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|tss_id=hg_100792.1 | |tss_id=hg_100792.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} | ||
Revision as of 15:28, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1193 |
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| Nearest PromoterID: | NR_121647 |
| Entrez ID: | 103352539 |
| Nearest Unigene: | Hs.351215 |
| Nearest Refseq: | NR_121647 |
| Nearest Ensembl: | ENSG00000238113 |
| Gene Name: | uncharacterized LOC107987020 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1410 |
| Gene Type: | ncRNA |
| CpG%: | 0.09 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.