TSS: Hg 100796.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000377311. | |all_trans=ENST00000377311.4:0 NM_153237:0 BC029780:13 KJ895755:66 DQ890797:66 DQ893952:66 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=0 | ||
|distance_to_tss=-15 | |distance_to_tss=-15 | ||
|end=68540884 | |end=68540884 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_153237 | |nearest_refseq=NM_153237 | ||
|nearest_unigene=Hs.663056 | |nearest_unigene=Hs.663056 | ||
|num_trans= | |num_trans=6 | ||
|species=human | |species=human | ||
|start=68540879 | |start=68540879 | ||
|start_of_center_position=68540881 | |start_of_center_position=68540881 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-35(GAGCATATAAAG,-,0.00),-33(GCATATAAAGCT,+,0.00) | ||
|transcript_name=ENST00000377311. | |transcript_name=ENST00000377311.4 NM_153237 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100796.1 | |tss_id=hg_100796.1 | ||
Revision as of 15:28, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -15 |
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| Nearest PromoterID: | NM_153237 |
| Entrez ID: | 169693 |
| Nearest Unigene: | Hs.663056 |
| Nearest Refseq: | NM_153237 |
| Nearest Ensembl: | ENSG00000181778 |
| Gene Name: | transmembrane protein 252 |
| Gene Alias: | C9orf71 |
| Gene Description: | transmembrane protein 252 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GAGCATATAAAG,-,0.00),-33(GCATATAAAGCT,+,0.00) |
TSS expression
Expression data not found.