TSS: Hg 10083.1: Difference between revisions
From referenceTSS
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|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-7526 | |distance_to_tss=-7526 | ||
|end=7954150 | |end=7954150 | ||
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|entrez_id=11315 | |entrez_id=11315 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias=DJ-1 | |gene_alias=DJ-1|DJ1|GATD2|HEL-S-67p | ||
|gene_description=Parkinsonism associated deglycase | |gene_description=Parkinsonism associated deglycase | ||
|gene_name=PARK7 | |gene_name=PARK7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000116288 | |nearest_ensembl=ENSG00000116288 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001123377 | ||
|nearest_refseq=NM_007262 | |nearest_refseq=NM_007262 | ||
|nearest_unigene=Hs.419640 | |nearest_unigene=Hs.419640 | ||
| Line 23: | Line 23: | ||
|start_of_center_position=7954127 | |start_of_center_position=7954127 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=11(TCCTTTAGAGCG,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 15:29, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -7526 |
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| Nearest PromoterID: | NM_001123377 |
| Entrez ID: | 11315 |
| Nearest Unigene: | Hs.419640 |
| Nearest Refseq: | NM_007262 |
| Nearest Ensembl: | ENSG00000116288 |
| Gene Name: | PARK7 |
| Gene Alias: | DJ-1 |
| Gene Description: | Parkinsonism associated deglycase |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 11(TCCTTTAGAGCG,+,0.00) |