TSS: Hg 100830.1: Difference between revisions

Revision as of 15:29, 15 June 2021

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

TATA-Box annotation

Distance to TSS:	61
Nearest PromoterID:	NR_038833
Entrez ID:	494558
Nearest Unigene:	Hs.130722
Nearest Refseq:	NR_038833
Nearest Ensembl:	ENSG00000225626
Gene Name:	C9orf135 divergent transcript
Gene Alias:	C9orf135-AS1
Gene Description:	C9orf135 divergent transcript
Gene Type:	ncRNA
CpG%:	0.055
GC%:	0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
-|all_trans=ENST00000453410.1:0 ENST00000526458.1:0 uc004ahk.5:0 uc064tpu.1:0 BC039385:0 ENST00000439418.1:-44 NR_038833:-44 uc022bhy.2:-44
+|all_trans=ENST00000662063.1:0 ENST00000453410.1:0 ENST00000652595.1:0 ENST00000526458.1:0 BC039385:0 ENST00000660402.1:1 ENST00000439418.1:-44 NR_038833:-44 ENST00000655860.1:-78
 |chr=chr9
 |cpg_percent=0.055
@@ Line 9: / Line 9: @@
 |entrez_id=494558
 |gc_percent=0.577114
-|gene_alias=-
+|gene_alias=C9orf135-AS1
-|gene_description=C9orf135 antisense RNA 1 (head to head)
+|gene_description=C9orf135 divergent transcript
 |gene_id=494558
-|gene_name=C9orf135 antisense RNA 1 (head to head)
+|gene_name=C9orf135 divergent transcript
 |gene_source=HGNC:48713
-|gene_symbol=C9orf135-AS1
+|gene_symbol=C9orf135-DT
 |gene_synonyms=
 |gene_type=ncRNA
 |hgnc_mgi_id=HGNC:48713
-|nearest_ensembl=
+|nearest_ensembl=ENSG00000225626
 |nearest_promoter_id=NR_038833
 |nearest_refseq=NR_038833
 |nearest_unigene=Hs.130722
-|num_trans=8
+|num_trans=9
 |species=human
 |start=69820660
 |start_of_center_position=69820677
 |strand=-
-|transcript_name=ENST00000453410.1 ENST00000526458.1 uc004ahk.5 uc064tpu.1 BC039385
+|transcript_name=ENST00000662063.1 ENST00000453410.1 ENST00000652595.1 ENST00000526458.1 BC039385
 |tss_classification=yes
 |tss_id=hg_100830.1