TSS: Hg 100861.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|BTEB1= | |BTEB1= | ||
|all_trans=LF211282:195 MA446859:195 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance= | |distance=195 | ||
|distance_to_tss=-5445 | |distance_to_tss=-5445 | ||
|end=70420120 | |end=70420120 | ||
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|entrez_id=687 | |entrez_id=687 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=BTEB | |gene_alias=BTEB|BTEB1 | ||
|gene_description=Kruppel like factor 9 | |gene_description=Kruppel like factor 9 | ||
|gene_name=KLF9 | |gene_name=KLF9 | ||
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|nearest_refseq=NM_001206 | |nearest_refseq=NM_001206 | ||
|nearest_unigene=Hs.150557 | |nearest_unigene=Hs.150557 | ||
|num_trans= | |num_trans=2 | ||
|species=human | |species=human | ||
|start=70420083 | |start=70420083 | ||
|start_of_center_position=70420101 | |start_of_center_position=70420101 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF211282 MA446859 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100861.1 | |tss_id=hg_100861.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Revision as of 15:29, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -5445 |
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| Nearest PromoterID: | NM_001206 |
| Entrez ID: | 687 |
| Nearest Unigene: | Hs.150557 |
| Nearest Refseq: | NM_001206 |
| Nearest Ensembl: | ENSG00000119138 |
| Gene Name: | KLF9 |
| Gene Alias: | BTEB |
| Gene Description: | Kruppel like factor 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |